PXD004433 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Saanich inlet water column metaproteomes |
Description | Metaproteomics and metagenomics of bacterial species in the seasonally anoxic fjord Saanich Inlet |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:30:35.559.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Matthew Monroe |
SpeciesList | scientific name: environmental samples; NCBI TaxID: 48479; |
ModificationList | Oxidation |
Instrument | LTQ; LTQ Orbitrap Velos; LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-06-24 03:52:22 | ID requested | |
1 | 2017-10-31 07:10:42 | announced | |
2 | 2017-11-06 00:51:16 | announced | Updated publication reference for PubMed record(s): 29087368. |
⏵ 3 | 2024-10-22 04:30:37 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1038/sdata.2017.160; |
Hawley AK, Torres-Beltr, รก, n M, Zaikova E, Walsh DA, Mueller A, Scofield M, Kheirandish S, Payne C, Pakhomova L, Bhatia M, Shevchuk O, Gies EA, Fairley D, Malfatti SA, Norbeck AD, Brewer HM, Pasa-Tolic L, Del Rio TG, Suttle CA, Tringe S, Hallam SJ, A compendium of multi-omic sequence information from the Saanich Inlet water column. Sci Data, 4():170160(2017) [pubmed] |
Keyword List
curator keyword: Metaproteomics |
submitter keyword: Metaproteomics,Microbial, Marine |
Contact List
Steven Hallam |
contact affiliation | University of British Columbia |
contact email | shallam@mail.ubc.ca |
lab head | |
Matthew Monroe |
contact affiliation | Pacific Northwest National Laboratory |
contact email | matthew.monroe@pnnl.gov |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/10/PXD004433 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD004433
- Label: PRIDE project
- Name: Saanich inlet water column metaproteomes