PXD004400 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Akkermansia muciniphila proteome. |
Description | Akkermansia muciniphila, a common member of the human gut microbiota, is considered to be a beneficial resident of the intestinal mucus layer. Surface-exposed molecules produced by this organism likely play important roles in colonization and communication with other microbes and the host, but the protein composition of the outer membrane has not been characterized thus far. Herein we identify A. muciniphila proteins after enrichment and fractionation of the outer membrane proteome of A. muciniphila. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:30:44.202.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sjef Boeren |
SpeciesList | scientific name: Akkermansia muciniphila ATCC BAA-835; NCBI TaxID: 349741; |
ModificationList | acetylated residue; iodoacetamide derivatized residue; deamidated residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-06-21 06:43:16 | ID requested | |
1 | 2016-09-27 09:39:10 | announced | |
⏵ 2 | 2024-10-22 04:30:46 | announced | 2024-10-22: Updated project metadata. |
Publication List
Ottman N, Huuskonen L, Reunanen J, Boeren S, Klievink J, Smidt H, Belzer C, de Vos WM, Characterization of Outer Membrane Proteome of Akkermansia muciniphila Reveals Sets of Novel Proteins Exposed to the Human Intestine. Front Microbiol, 7():1157(2016) [pubmed] |
10.3389/fmicb.2016.01157; |
Keyword List
curator keyword: Biological |
submitter keyword: pili, gut microbiota,Akkermansia muciniphila, verrucomicrobia, outer membrane |
Contact List
Sjef Boeren |
contact affiliation | Wageningen University |
contact email | sjef.boeren@wur.nl |
lab head | |
Sjef Boeren |
contact affiliation | Biochemistry |
contact email | sjef.boeren@wur.nl |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/09/PXD004400 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD004400
- Label: PRIDE project
- Name: Akkermansia muciniphila proteome.