PXD004305

PXD004305 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis
Description	Study on proteins secreted by C. pinesis upon growth on mannan substrates, focusing on carbohydrate active proteins
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:30:27.834.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tina Rise Tuveng
SpeciesList	scientific name: Chitinophaga pinensis; NCBI TaxID: 79329;
ModificationList	deaminated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-06-10 04:32:23	ID requested
1	2017-01-16 09:05:29	announced
⏵ 2	2024-10-22 04:30:28	announced	2024-10-22: Updated project metadata.

Publication List

Larsbrink J, Tuveng TR, Pope PB, Bulone V, Eijsink VG, Brumer H, McKee LS, Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis. J Proteomics, 156():63-74(2017) [pubmed]
10.1016/j.jprot.2017.01.003;

Larsbrink J, Tuveng TR, Pope PB, Bulone V, Eijsink VG, Brumer H, McKee LS, Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis. J Proteomics, 156():63-74(2017) [pubmed]

10.1016/j.jprot.2017.01.003;

Keyword List

curator keyword: Biological
submitter keyword: mannan,Chitinophaga pinensis, secretome

curator keyword: Biological

submitter keyword: mannan,Chitinophaga pinensis, secretome

Contact List

Vincent G.H. Eijsink
contact affiliation	Protein Engineering and Proteomics group (PEP) at the Norwegian University of Life Sciences
contact email	vincent.eijsink@nmbu.no
lab head
Tina Rise Tuveng
contact affiliation	Norwegian University of Life Sciences
contact email	tina.tuveng@nmbu.no
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/01/PXD004305
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/01/PXD004305

PRIDE project URI

Repository Record List

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