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PXD004209

PXD004209 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleA detailed proteomic analysis of plasma membrane from zebrafish brain
DescriptionThe brain plasma membrane proteome represents the major subsets of signaling proteins and promising drug targets though often understudied due to traditional experimental difficulties. Here we report a comprehensive dataset of the proteins identified in the highly enriched plasma membrane of zebrafish brain by applying multidimensional liquid chromatography coupled with tandem-mass spectrometry (MS/MS). A total number of 108767 peptide groups were identified resulting in 9201 proteins. These included brain receptors, transporters and channels that are important elements linked to brain functions, diseases and drug discovery.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:29:53.035.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterRoman Smidak
SpeciesList scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-05-23 07:59:08ID requested
12018-07-05 06:47:37announced
22024-10-22 04:30:01announced2024-10-22: Updated project metadata.
Publication List
10.1002/prca.201600081;
Smidak R, Aradska J, Kirchberger S, Distel M, Sialana FJ, Wackerlig J, Mechtcheriakova D, Lubec G, A detailed proteomic profiling of plasma membrane from zebrafish brain. Proteomics Clin Appl, 10(12):1264-1268(2016) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: zebrafish brain, membrane proteome
Contact List
Prof. Gert Lubec
contact affiliationMedical University of Vienna, Vienna, Austria
contact emaillubec@gmx.at
lab head
Roman Smidak
contact affiliationMedical University of Vienna
contact emailroman.smidak@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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