PXD004094

PXD004094 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	proteomics profiling of early retina degeneration of RCS rats
Description	We employed proteomics analysis approach for in-depth retinal protein profiling of dystrophic RCS rats and non-dystrophic congenic controls through LTQ-orbitrap MS. We aim to identify the key molecular pathways and transcript factors involved in early retinal degeneration by differential proteomics analysis.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:30:25.653.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Martin Ju
SpeciesList	scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116;
ModificationList	acetylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-05-04 00:48:36	ID requested
1	2021-03-04 13:03:01	announced
⏵ 2	2024-10-22 04:30:33	announced	2024-10-22: Updated project metadata.

Publication List

10.18240/ijo.2017.06.08;
Zhu ZH, Fu Y, Weng CH, Zhao CJ, Yin ZQ, Proteomic profiling of early degenerative retina of RCS rats. Int J Ophthalmol, 10(6):878-889(2017) [pubmed]

10.18240/ijo.2017.06.08;

Zhu ZH, Fu Y, Weng CH, Zhao CJ, Yin ZQ, Proteomic profiling of early degenerative retina of RCS rats. Int J Ophthalmol, 10(6):878-889(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: RCS rat, LC-MS, orbitrap, retinitis pigmentosa, retina

curator keyword: Biological

submitter keyword: RCS rat, LC-MS, orbitrap, retinitis pigmentosa, retina

Contact List

ZhengQin Yin
contact affiliation	Southwest Hospital/Southwest Eye Hospital, Third Military Medical University, Chong Qing, 400038, China
contact email	qinzyin@aliyun.com
lab head
Martin Ju
contact affiliation	southwest eye hospital, third medicine military university
contact email	zhuzhi258@163.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD004094
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD004094

PRIDE project URI

Repository Record List

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