PXD004085

PXD004085 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteomics on wt-MCF7 versus their LTED derivatives using dimethyl labelling
Description	Wild type (wt) MCF7 cells, modelling breast cancer at primary diagnosis, were cultured in phenol red-free RPMI supplemented with 10% FBS and 1nM estradiol (E2). Long-term oestrogen deprived (LTED) cell lines, which model resistance to endocrine therapy, were cultured in phenol red-free RPMI in the absence of exogenous E2 and supplemented with 10% dextran charcoal-stripped bovine serum (DCC). Samples were harvested at baseline and at the point of resistance (LTED). To reveal differential protein abundances between wt-MCF7 and MCF7 LTED, the peptides were labelled with chemical labelling and underwent fractionation using OFFGEL electrophoresis.
HostingRepository	PRIDE
AnnounceDate	2016-06-01
AnnouncementXML	Submission_2016-06-01_01:45:00.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nikiana Simigdala
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2016-05-02 05:53:17	ID requested
⏵ 1	2016-06-01 01:45:01	announced

Dataset with its publication pending

curator keyword: Biomedical

submitter keyword: dimethyl labelling, MCF7, LTED

Lesley-Ann Martin
contact affiliation	The Institute of Cancer Research The Breast Cancer Now Toby Robins Research Centre
contact email	Lesley-Ann.Martin@icr.ac.uk
lab head
Nikiana Simigdala
contact affiliation	The Institute of Cancer Research
contact email	Nikiana.Simigdala@icr.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD004085

PRIDE project URI

• PRIDE
  1. PXD004085
     1. Label: PRIDE project
     2. Name: Quantitative proteomics on wt-MCF7 versus their LTED derivatives using dimethyl labelling