PXD004075 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Spatiotemporal proteomic profiling of cerebral development |
Description | iPS cell based neuronal differentiation was used to generate pure NPCs and maturing nerons in tissue culture. LFQ mass spectrometry on Q Exactive was used to measure proteomic profile differences between the generated cell types. The identified proteomic signatures were then compared to human fetal cerebral development over the developmental age of 16-36 gestational weeks in four macrodissected regions. Statistical analysis were performed using the Perseus program to compare the datasets and identify spatiotemporally relevant protein modules. |
HostingRepository | PRIDE |
AnnounceDate | 2017-07-14 |
AnnouncementXML | Submission_2017-07-14_01:24:29.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ugljesa Djuric |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-04-29 03:04:24 | ID requested | |
⏵ 1 | 2017-07-14 01:24:30 | announced | |
Publication List
Djuric U, Rodrigues DC, Batruch I, Ellis J, Shannon P, Diamandis P, Spatiotemporal Proteomic Profiling of Human Cerebral Development. Mol Cell Proteomics, 16(9):1548-1562(2017) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: LC-MSMS, neuronal differentiation |
Contact List
Eleftherios Diamandis |
contact affiliation | Mount Sinai Hospital and University Health Network |
contact email | Eleftherios.Diamandis@sinaihealthsystem.ca |
lab head | |
Ugljesa Djuric |
contact affiliation | Mt. Sinai Hospital |
contact email | ugljesa.djuric@mail.utoronto.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD004075 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD004075
- Label: PRIDE project
- Name: Spatiotemporal proteomic profiling of cerebral development