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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2017-07-14
  • AnnouncementXML: Submission_2017-07-14_01:24:29.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Ugljesa Djuric
  • Title: Spatiotemporal proteomic profiling of cerebral development
  • Description: iPS cell based neuronal differentiation was used to generate pure NPCs and maturing nerons in tissue culture. LFQ mass spectrometry on Q Exactive was used to measure proteomic profile differences between the generated cell types. The identified proteomic signatures were then compared to human fetal cerebral development over the developmental age of 16-36 gestational weeks in four macrodissected regions. Statistical analysis were performed using the Perseus program to compare the datasets and identify spatiotemporally relevant protein modules.
  • SpeciesList: scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
  • ModificationList: No PTMs are included in the dataset
  • Instrument: Q Exactive

Dataset History

VersionDatetimeStatusChangeLog Entry
02016-04-29 03:04:24ID requested
12017-07-14 01:24:30announced

Publication List

  1. Djuric U, Rodrigues DC, Batruch I, Ellis J, Shannon P, Diamandis P, Spatiotemporal Proteomic Profiling of Human Cerebral Development. Mol Cell Proteomics, 16(9):1548-1562(2017) [pubmed]

Keyword List

  1. curator keyword: Biological
  2. submitter keyword: LC-MSMS, neuronal differentiation

Contact List

    Eleftherios Diamandis
    • contact affiliation: Mount Sinai Hospital and University Health Network
    • contact email: Eleftherios.Diamandis@sinaihealthsystem.ca
    • lab head:
    Ugljesa Djuric
    • contact affiliation: Mt. Sinai Hospital
    • contact email: ugljesa.djuric@mail.utoronto.ca
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List
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