PXD004055

PXD004055 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Large-scale phosphorylation site interaction proteomics
Description	Receptor tyrosine kinases (RTKs) are membrane proteins that regulate complex, multilayered signaling networks centered on tyrosine phosphorylation of proteins with broad implications in human health and disease. Here we developed a large-scale mass spectrometry-based proteomics platform for investigation of in-vivo RTK signaling networks and the dynamic protein interactions they induce.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:49:06.549.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Christian Kelstrup
SpeciesList	scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116;
ModificationList	phosphorylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-04-26 05:47:06	ID requested
1	2019-10-04 03:56:27	announced
2	2019-10-07 01:40:48	announced	2019-10-07: Updated publication reference for PubMed record(s): 31585087. 2019-10-07: Updated publication reference for DOI(s): https://doi.org/10.1016/j.cell.2019.09.008.
3	2023-05-15 01:51:36	announced	2023-05-15: Updated project metadata.
⏵ 4	2023-11-14 08:49:07	announced	2023-11-14: Updated project metadata.

Publication List

Lundby A, Franciosa G, Emdal KB, Refsgaard JC, Gnosa SP, Bekker-Jensen DB, Secher A, Maurya SR, Paul I, Mendez BL, Kelstrup CD, Francavilla C, Kveiborg M, Montoya G, Jensen LJ, Olsen JV, Oncogenic Mutations Rewire Signaling Pathways by Switching Protein Recruitment to Phosphotyrosine Sites. Cell, 179(2):543-560.e26(2019) [pubmed]

Lundby A, Franciosa G, Emdal KB, Refsgaard JC, Gnosa SP, Bekker-Jensen DB, Secher A, Maurya SR, Paul I, Mendez BL, Kelstrup CD, Francavilla C, Kveiborg M, Montoya G, Jensen LJ, Olsen JV, Oncogenic Mutations Rewire Signaling Pathways by Switching Protein Recruitment to Phosphotyrosine Sites. Cell, 179(2):543-560.e26(2019) [pubmed]

Keyword List

ProteomeXchange project tag: EPIC-XS
submitter keyword: phosphorylation
interaction proteomics

ProteomeXchange project tag: EPIC-XS

submitter keyword: phosphorylation

interaction proteomics

Contact List

Jesper V. Olsen
contact affiliation	The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark
contact email	jesper.olsen@cpr.ku.dk
lab head
Christian Kelstrup
contact affiliation	University of Copenhagen
contact email	chdake@cpr.ku.dk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD004055
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD004055

PRIDE project URI

Repository Record List

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