PXD004008 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Transcriptomics – assisted proteome profiling of black pepper (Piper nigrum L.) |
Description | This study was designed to evaluate the proteome profiles of Piper nigrum when challenged with three different biotic stress. We have utilized a transcriptome-assisted protein identification pipeline coupled with a BLAST2GO annotation. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:49:05.157.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD004008 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Chidambareswaren Mahadevan |
SpeciesList | scientific name: Piper nigrum; NCBI TaxID: 13216; |
ModificationList | Oxidation; Carbamidomethyl |
Instrument | Synapt MS |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-04-19 02:02:36 | ID requested | |
1 | 2022-03-02 03:57:02 | announced | |
⏵ 2 | 2023-11-14 08:49:06 | announced | 2023-11-14: Updated project metadata. |
Publication List
Keyword List
curator keyword: Biological |
submitter keyword: nanoACQUITY UPLC, LC-MSE,Piper nigrum, ProteinLynx Global SERVER |
Contact List
Manjula Sakuntala |
contact affiliation | Rajiv Gandhi Center for Biotechnology |
contact email | smanjula@rgcb.res.in |
lab head | |
Chidambareswaren Mahadevan |
contact affiliation | University of Oxford |
contact email | chidambareswaren@rgcb.res.in |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD004008 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD004008
- Label: PRIDE project
- Name: Transcriptomics – assisted proteome profiling of black pepper (Piper nigrum L.)