PXD003807

PXD003807 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Analysis of Reproducibility of Proteome Coverage and Quantitation Using Isobaric Mass Tags (iTRAQ and TMT)
Description	This study aimed to compare the depth and reproducibility of total proteome and differentially expressed protein coverage in technical duplicates and triplicates using iTRAQ 4-plex, iTRAQ 8-plex and TMT 6-plex reagents.
HostingRepository	MassIVE
AnnounceDate	2017-03-16
AnnouncementXML	Submission_2017-03-16_09:56:21.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Javed Khan
SpeciesList	scientific name: Phaeosphaeria nodorum SN15; NCBI TaxID: 321614;
ModificationList	TMT6plex; iTRAQ4plex; iTRAQ8plex; Methylthio; Oxidation
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-03-17 21:59:32	ID requested
⏵ 1	2017-03-16 09:56:23	announced

Publication List

Casey TM, Khan JM, Bringans SD, Koudelka T, Takle PS, Downs RA, Livk A, Syme RA, Tan KC, Lipscombe RJ, Analysis of Reproducibility of Proteome Coverage and Quantitation Using Isobaric Mass Tags (iTRAQ and TMT). J Proteome Res, 16(2):384-392(2017) [pubmed]

Casey TM, Khan JM, Bringans SD, Koudelka T, Takle PS, Downs RA, Livk A, Syme RA, Tan KC, Lipscombe RJ, Analysis of Reproducibility of Proteome Coverage and Quantitation Using Isobaric Mass Tags (iTRAQ and TMT). J Proteome Res, 16(2):384-392(2017) [pubmed]

Keyword List

submitter keyword: iTRAQ, TMT, Reproducibility

submitter keyword: iTRAQ, TMT, Reproducibility

Contact List

Richard J Lipscombe
lab head
Javed Khan
contact affiliation	Proteomics International
contact email	javed@proteomics.com.au
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000079594

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000079594