PXD003791

PXD003791 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	MuSt multiomics
Description	Multiomics of faecal samples collected from individuals in families with multiple cases of type 1 diabetes mellitus (T1DM) over 3 or 4 months. Metagenomic and metatranscriptomic sequencing and metaproteomics were carried out, as well as whole human genome sequencing. Phenotypic data is available.
HostingRepository	PRIDE
AnnounceDate	2017-10-24
AnnouncementXML	Submission_2017-10-24_01:13:52.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Anna Heintz-Buschart
SpeciesList	scientific name: mixed culture metagenome; NCBI TaxID: 1306859;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-03-15 04:21:25	ID requested
1	2016-08-22 07:57:54	announced
2	2016-10-17 03:39:04	announced	Updated publication reference for PubMed record(s): 27723761.
3	2017-06-20 05:44:26	announced	Updated project metadata.
⏵ 4	2017-10-24 01:13:54	announced	Updated project metadata.

Publication List

Heintz-Buschart A, May P, Laczny CC, Lebrun LA, Bellora C, Krishna A, Wampach L, Schneider JG, Hogan A, de Beaufort C, Wilmes P, Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes. Nat Microbiol, 2():16180(2016) [pubmed]

Heintz-Buschart A, May P, Laczny CC, Lebrun LA, Bellora C, Krishna A, Wampach L, Schneider JG, Hogan A, de Beaufort C, Wilmes P, Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes. Nat Microbiol, 2():16180(2016) [pubmed]

Keyword List

submitter keyword: Human microbiome, gastrointestinal, faecal, type 1 diabetes, families

submitter keyword: Human microbiome, gastrointestinal, faecal, type 1 diabetes, families

Contact List

Paul Wilmes
contact affiliation	Luxembourg Centre for Systems Biomedicine
contact email	paul.wilmes@uni.lu
lab head
Anna Heintz-Buschart
contact affiliation	Luxembourg Centre for Systems Biomedicine
contact email	anna.buschart@uni.lu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/08/PXD003791
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/08/PXD003791

PRIDE project URI

Repository Record List

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