PXD003781

PXD003781 is an original dataset announced via ProteomeXchange.

Title	Parallel reaction monitoring using quadrupole-orbitrap mass spectrometer: principle and applications
Description	The PRM dataset corresponds to the raw data files supporting the comparison between conventional database search using Mascot and spectral matching strategy (Figure 3). The PRM and DDA raw data files support the comparison between these two acquisition methods using the spectral matching strategy to corroborate the identity of the peptides (Figure 4D). The data were generated from the triplicate analyses of a dilution series of 778 SIL peptides spiked in a yeast tryptic digest at concentrations ranging from 50 amol/µL to 37 fmol/µL.
HostingRepository	PRIDE
AnnounceDate	2016-05-09
AnnouncementXML	Submission_2016-05-09_01:13:24.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Adèle Bourmaud
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	6x(13)C: 4x(15)N labeled L-arginine; 6x(13)C: 2x(15)N labeled L-lysine; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-03-14 03:49:37	ID requested
⏵ 1	2016-05-09 01:13:25	announced

Bourmaud A, Gallien S, Domon B, Parallel reaction monitoring using quadrupole-Orbitrap mass spectrometer: Principle and applications. Proteomics, 16(15-16):2146-59(2016) [pubmed]

submitter keyword: PRM, DDA, exploratory study

Bruno Domon
contact affiliation	Luxembourg Clinical Proteomics Center, Luxembourg Institute of Health, Luxembourg (lab head)
contact email	bruno.domon@lih.lu
lab head
Adèle Bourmaud
contact affiliation	LIH
contact email	adele.bourmaud@lih.lu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/05/PXD003781

PRIDE project URI

• PRIDE
  1. PXD003781
     1. Label: PRIDE project
     2. Name: Parallel reaction monitoring using quadrupole-orbitrap mass spectrometer: principle and applications