PXD003727

PXD003727 is an original dataset announced via ProteomeXchange.

Title	Proteome profile of Perkinsus marinus
Description	Perkinsus marinus is an intracellular parasitic protozoan that is responsible for serious disease epizootics in marine bivalve molluscs worldwide and along with P. olseni belongs to the OIE list of notified diseases. Despite all available information on P. marinus genomics, more baseline data is required at the proteomic level for a better understanding of P. marinus biological processes, including virulence mechanisms. In the present study, we have established in vitro clonal cultures of P. marinus from infected gills and mantle tissues of C. rhizophorae to evaluate the parasite cellular proteomic profile. A high throughput label-free shotgun HDMS approach using nanoUPLC-MS was used. Our intention was to provide the first comprehensive proteome profile of P. marinus that might serve as a valuable resource for future investigations involving comparative analyses of P. marinus from different regions, as well as comparisons of different species of Perkinsus.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_06:48:26.095.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Henrique César Pereira Figueiredo
SpeciesList	scientific name: Perkinsus marinus; NCBI TaxID: 31276;
ModificationList	No PTMs are included in the dataset
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2016-03-02 02:15:02	ID requested
1	2018-01-08 01:24:15	announced
2	2018-05-23 01:52:45	announced	Updated publication reference for DOI(s): 10.14302/issn.2326-0793.jpgr-17-1571.
⏵ 3	2023-11-14 06:48:26	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

curator keyword: Biological

submitter keyword: in vitro culture, virulence, Crassostrea rhizophorae,Perkinsus marinus, label-free shotgun HDMS

Henrique César Pereira Figueiredo
contact affiliation	National Reference Laboratory for Aquatic Animal Deseases, Ministry of Fisheries and Aquaculture, Federal University of Minas Gerais
contact email	figueiredoh@yahoo.com
lab head
Henrique César Pereira Figueiredo
contact affiliation	National Reference Laboratory for Aquatic Animal Diseases Federal University of Minas Gerais
contact email	figueiredoh@yahoo.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/01/PXD003727

PRIDE project URI

• PRIDE
  1. PXD003727
     1. Label: PRIDE project
     2. Name: Proteome profile of Perkinsus marinus