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PXD003711

PXD003711 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteomics analysis of soybean root exposed to varying sizes of silver nanoparticles under flooding stress
DescriptionBecause of the tremendous use of NPs in the agricultural sector (Vernikov et al., 2009) and their interactions with the plants, the effect of NPs in plants needs to be explored at the molecular level. To investigate the effects of varying sizes of silver NPs on early-stage soybean under flooding stress, morphological and proteomic analyses were performed. In this study, 5 ppm silver NPs were used because 5 ppm of silver NPs were reported to promote the soybean growth under flooding stress (Mustafa et al., 2015). In the present study, the silver NPs induced changes, in the soybean proteins under flooding stress, was evaluated using gel-free proteomic technique.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:14:04.321.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterGhazala Mustafa
SpeciesList scientific name: Glycine max; NCBI TaxID: 3847;
ModificationListiodoacetamide derivatized residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-02-29 02:46:33ID requested
12016-08-08 07:52:41announced
22024-10-22 04:14:06announced2024-10-22: Updated project metadata.
Publication List
Mustafa G, Sakata K, Komatsu S, Proteomic analysis of soybean root exposed to varying sizes of silver nanoparticles under flooding stress. J Proteomics, 148():113-25(2016) [pubmed]
10.1016/j.jprot.2016.07.027;
Keyword List
curator keyword: Biological
submitter keyword: soybean, flooding stress, proteomics, silver nanoparticles, root
Contact List
Setsuko Komatsu
contact affiliationNARO Institute of Crop Science, Tsukuba, Japan
contact emailkomatsu.setsuko.fu@u.tsukuba.ac.jp
lab head
Ghazala Mustafa
contact affiliationNARO Institute of Crop Science, University of Tsukuba
contact emailghazalamustafa@affrc.go.jp
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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