PXD003689

PXD003689 is an original dataset announced via ProteomeXchange.

Title	A proteome analysis of freezing tolerance in red clover (Trifolium pratense L.)
Description	Improvement of freezing tolerance of red clover (Trifolium pratense L.) would increase its persistence under cold climate. In this study, we assessed the freezing tolerance and compared the proteome composition of non-acclimated and cold-acclimated plants of two initial cultivars of red clover: Endure (E-TF0) and Christie (C-TF0) and of populations issued from these cultivars after three (TF3) and four (TF4) cycles of phenotypic recurrent selection for superior freezing tolerance. Through this approach, we wanted to identify proteins that are associated with the improvement of freezing tolerance in red clover. Recurrent selection performed indoor is an effective approach to improve the freezing tolerance of red clover. Significant improvement of freezing tolerance by recurrent selection was associated with differential accumulation of a small number of cold-regulated proteins that may play an important role in the determination of the level of freezing tolerance.
HostingRepository	PRIDE
AnnounceDate	2016-03-15
AnnouncementXML	Submission_2016-03-15_02:33:39.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jenny Renaut
SpeciesList	scientific name: Trifolium pratense subsp. pratense; NCBI TaxID: 1211620;
ModificationList	Oxidation of Trp to kynurenine; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	4800 Proteomics Analyzer

Revision	Datetime	Status	ChangeLog Entry
0	2016-02-25 03:32:08	ID requested
⏵ 1	2016-03-15 02:33:40	announced

Bertrand A, Bipfubusa M, Castonguay Y, Rocher S, Szopinska-Morawska A, Papadopoulos Y, Renaut J, A proteome analysis of freezing tolerance in red clover (Trifolium pratense L.). BMC Plant Biol, 16():65(2016) [pubmed]

curator keyword: Biological

submitter keyword: Red clover

cold acclimation

proteomic analysis

recurrent selection

freezing tolerance

plant abiotic stress.

Jenny Renaut
contact affiliation	Luxembourg Institute of Science and Technology “Environmental Research and Innovation” (ERIN) department 41, rue du Brill, L-4422 Belvaux LUXEMBOURG Tel +tel: +352 275 888- 860 Fax +352 275 885
contact email	jenny.renaut@list.lu
lab head
Jenny Renaut
contact affiliation	LIST
contact email	jenny.renaut@list.lu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/03/PXD003689

PRIDE project URI

• PRIDE
  1. PXD003689
     1. Label: PRIDE project
     2. Name: A proteome analysis of freezing tolerance in red clover (Trifolium pratense L.)