PXD003672 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteome Remodeling in Response to Sulfur Limitation in Candidatus Pelagibacter ubique |
Description | P. ubique was investigated to understand the response to limited sulfur in seawater. Sulfur absorption was found to be localized to a rapidly evolving region of the genome. |
HostingRepository | PRIDE |
AnnounceDate | 2017-10-24 |
AnnouncementXML | Submission_2017-10-24_01:12:27.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD003672 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Matthew Monroe |
SpeciesList | scientific name: Pelagibacter ubique; NCBI TaxID: 198252; |
ModificationList | Oxidation |
Instrument | LTQ Orbitrap Velos; LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-02-22 05:26:51 | ID requested | |
1 | 2016-07-05 05:42:43 | announced | |
2 | 2016-11-21 05:11:53 | announced | Updated publication reference for PubMed record(s): 27822545. |
⏵ 3 | 2017-10-24 01:12:28 | announced | Updated project metadata. |
Publication List
Smith DP, Nicora CD, Carini P, Lipton MS, Norbeck AD, Smith RD, Giovannoni SJ, Pelagibacter ubique". mSystems, 1(4):(2016) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: SAR11, sulfur, marine |
Contact List
Stephen Giovannoni |
contact affiliation | Oregon State University, USA |
contact email | Steve.giovannoni@oregonstate.edu |
lab head | |
Matthew Monroe |
contact affiliation | Biological Separations & Mass Spectrometry |
contact email | matthew.monroe@pnl.gov |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/07/PXD003672 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003672
- Label: PRIDE project
- Name: Proteome Remodeling in Response to Sulfur Limitation in Candidatus Pelagibacter ubique