PXD003671

PXD003671 is an original dataset announced via ProteomeXchange.

Title	Proteomic and physiological analyses of seeds of wheat varieties under copper and iron nanoparticles exposure
Description	Drought and salinity reduce plant growth and grain yield in wheat. To explain the role of Cu and Fe NPs in the improvement of growth and yield of wheat varieties, gel-free proteomic technique was used. Spike length, number of grains per spike, and 100 grain weight were increased at 25 ppm Cu and Fe NPs in high yielding galaxy-13, drought tolerant Pakistan-13, and salinity tolerant NARC-11. A total of 86, 131, and 30 proteins were significantly changed in abundance under Cu and Fe NPs exposure. The number of proteins related to stress, proteins, and glycolysis were mainly changed by Cu and Fe NPs exposure. By Cu NPs, in galaxy-13 starch degradation and glycolysis pathway were increased, while decreased in Pakistan-13 and NARC-11. Furthermore, by Fe NPs, only in galaxy-13 tricarboxylic acid cycle was increased while did not change glycolysis and starch degradation. Uptake of Cu NPs increased at 25 ppm in galaxy-13, Pakistan-13 and NARC-11 while Fe NPs uptake increased only at 35 and 40 ppm in NARC-11.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:09:20.029.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ghazala Mustafa
SpeciesList	scientific name: Triticum aestivum (Wheat); NCBI TaxID: 4565;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2016-02-22 01:23:53	ID requested
1	2016-10-12 01:57:38	announced
⏵ 2	2024-10-22 04:09:20	announced	2024-10-22: Updated project metadata.

Yasmeen F, Raja NI, Razzaq A, Komatsu S, Proteomic and physiological analyses of wheat seeds exposed to copper and iron nanoparticles. Biochim Biophys Acta Proteins Proteom, 1865(1):28-42(2017) [pubmed]

10.1016/j.bbapap.2016.10.001;

curator keyword: Biological

submitter keyword: iron nanoparticles, proteomics, seed,wheat, copper nanoparticles

Setsuko KOMATSU
contact affiliation	National Institute of Crop Science, Tsukuba, Japan
contact email	komatsu.setsuko.fu@u.tsukuba.ac.jp
lab head
Ghazala Mustafa
contact affiliation	NARO Institute of Crop Science, University of Tsukuba
contact email	ghazalamustafa@affrc.go.jp
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD003671
     1. Label: PRIDE project
     2. Name: Proteomic and physiological analyses of seeds of wheat varieties under copper and iron nanoparticles exposure