PXD003662

PXD003662 is an original dataset announced via ProteomeXchange.

Title	Multiple pathways for aerobic and arsenate respiration of Melioribacter roseus, a metabolically versatile bacterium representing of Ignavibacteriae phylum
Description	Melioribacter roseus is one of two cultured representatives of the phylum Ignavibacteriae. It could grow by fermentation of sugars and peptides, by aerobic respiration or by dissimilatory reduction of arsenate, nitrite or Fe(III) on fermentable and non-fermentable substrates, what allows this bacterium to adapt to fluctuating environmental conditions. Primary genome analysis highlighted key determinants of electron transport chains, providing important insights into the ability of M. roseus to use a range of electron acceptors. Complete set of genes for proton-translocating membrane complexes I and II, alternative complex III (ACIII) and seven terminal oxidoreductases was found in the M. roseus genome. Among those three different cytochrome oxidases and two different molybdopterin oxidoreductases have been proposed to determine two most active respiratory processes performed by M. roseus – aerobic respiration and dissimilatory arsenate reduction, respectively.
HostingRepository	PRIDE
AnnounceDate	2017-07-19
AnnouncementXML	Submission_2017-07-19_01:01:08.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD003662
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Ilya Altukhov
SpeciesList	scientific name: Melioribacter roseus (strain JCM 17771 / P3M-2); NCBI TaxID: 1191523;
ModificationList	S-methyl-L-methionine; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2016-02-18 12:20:47	ID requested
⏵ 1	2017-07-19 01:01:10	announced

Gavrilov S, Podosokorskaya O, Alexeev D, Merkel A, Khomyakova M, Muntyan M, Altukhov I, Butenko I, Bonch-Osmolovskaya E, Govorun V, Kublanov I, , Residing in a Deep Thermal Aquifer of the West-Siberian Megabasin. Front Microbiol, 8():1228(2017) [pubmed]

curator keyword: Biological

submitter keyword: Melioribacter roseus, LC-MS/MS

Gleb Fisunov
contact affiliation	PhD, Federal Research and Clinical Centre of Physical-Chemical Medicine
contact email	herr.romanoff@gmail.com
lab head
Ilya Altukhov
contact affiliation	Research Institute of Physical Chemical Medicine
contact email	ilya.altukhov@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD003662

PRIDE project URI

• PRIDE
  1. PXD003662
     1. Label: PRIDE project
     2. Name: Multiple pathways for aerobic and arsenate respiration of Melioribacter roseus, a metabolically versatile bacterium representing of Ignavibacteriae phylum