PXD003616

PXD003616 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mouse_T1D_microbiota - Clostridial Butyrate Biosynthesis Enzymes Are Significantly Depleted in the Gut Microbiota of Nonobese Diabetic Mice
Description	A metaproteomic approach was exploited to investigate microbiota protein expression in feces from Eα16 and NOD mice at 10 weeks of age (n=6 vs 6 mice)
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:10:05.951.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alessandro Tanca
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: gut metagenome; NCBI TaxID: 749906;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-02-11 02:32:09	ID requested
1	2018-10-15 13:55:10	announced
2	2018-11-04 15:55:05	announced	Updated publication reference for PubMed record(s): 30355671.
⏵ 3	2024-10-22 04:10:08	announced	2024-10-22: Updated project metadata.

Publication List

10.1128/msphere.00492-18;
Tanca A, Palomba A, Fraumene C, Manghina V, Silverman M, Uzzau S, Clostridial Butyrate Biosynthesis Enzymes Are Significantly Depleted in the Gut Microbiota of Nonobese Diabetic Mice. mSphere, 3(5):(2018) [pubmed]

10.1128/msphere.00492-18;

Tanca A, Palomba A, Fraumene C, Manghina V, Silverman M, Uzzau S, Clostridial Butyrate Biosynthesis Enzymes Are Significantly Depleted in the Gut Microbiota of Nonobese Diabetic Mice. mSphere, 3(5):(2018) [pubmed]

Keyword List

curator keyword: Biological, Biomedical
submitter keyword: butyrate, gut microbiota, mouse,diabetes, metaproteomics

curator keyword: Biological, Biomedical

submitter keyword: butyrate, gut microbiota, mouse,diabetes, metaproteomics

Contact List

Sergio Uzzau
contact affiliation	Porto Conte Ricerche, Science and Technology Park of Sardinia, Alghero, Italy
contact email	uzzau@portocontericerche.it
lab head
Alessandro Tanca
contact affiliation	Proteomics Laboratory, Porto Conte Ricerche, Alghero, Italy
contact email	tanca@portocontericerche.it
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD003616
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD003616

PRIDE project URI

Repository Record List

[ + ]