PXD003607

PXD003607 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Ovarian Cancer Proteomics of FFPE Tissue
Description	We have performed in-depth examination of single tissue sections from a collection of FFPE and Frozen treated tumors, as well as cell line material all originating from different subtypes of epithelial ovarian cancer (high-grade serous, clear cell, endometrioid). Data were prepared using a tandem mass tag 10plex protocol with MS3 analysis on an Orbitrap Fusion.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:28:29.552.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Christopher Hughes
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion ETD

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-02-10 01:43:50	ID requested
1	2016-10-13 00:51:40	announced
⏵ 2	2024-10-22 04:28:36	announced	2024-10-22: Updated project metadata.

Publication List

Hughes CS, McConechy MK, Cochrane DR, Nazeran T, Karnezis AN, Huntsman DG, Morin GB, Quantitative Profiling of Single Formalin Fixed Tumour Sections: proteomics for translational research. Sci Rep, 6():34949(2016) [pubmed]
10.1038/srep34949;

Hughes CS, McConechy MK, Cochrane DR, Nazeran T, Karnezis AN, Huntsman DG, Morin GB, Quantitative Profiling of Single Formalin Fixed Tumour Sections: proteomics for translational research. Sci Rep, 6():34949(2016) [pubmed]

10.1038/srep34949;

Keyword List

curator keyword: Biomedical
submitter keyword: Ovary, Ovarian Cancer, Serous, Tandem Mass Tags, Endometrioid, Clear Cell, Orbitrap Fusion

curator keyword: Biomedical

submitter keyword: Ovary, Ovarian Cancer, Serous, Tandem Mass Tags, Endometrioid, Clear Cell, Orbitrap Fusion

Contact List

Gregg Morin
contact affiliation	Proteomics Head, British Columbia Cancer Research Centre
contact email	gmorin@bcgsc.ca
lab head
Christopher Hughes
contact affiliation	BC Cancer Agency
contact email	chughes@bcgsc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/10/PXD003607
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/10/PXD003607

PRIDE project URI

Repository Record List

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