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PXD003501

PXD003501 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleG4 Quadruplex Binding Proteins
DescriptionIn this study we discover proteins that bind to G4 quadruplex DNA structure. We use modified c-myc quadruplex as a bait, and compare it to the control bait - T15 oligo. We use spectral counts and G-test to determine significant binders. T15 and G4 datafiles are uploaded
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:27:43.871.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterBoris Zybailov
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-01-21 02:42:16ID requested
12021-03-04 12:08:54announced
22024-10-22 04:27:46announced2024-10-22: Updated project metadata.
Publication List
Byrd AK, Zybailov BL, Maddukuri L, Gao J, Marecki JC, Jaiswal M, Bell MR, Griffin WC, Reed MR, Chib S, Mackintosh SG, MacNicol AM, Baldini G, Eoff RL, Raney KD, Evidence That G-quadruplex DNA Accumulates in the Cytoplasm and Participates in Stress Granule Assembly in Response to Oxidative Stress. J Biol Chem, 291(34):18041-57(2016) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: Metastatic Melanoma WM 266-4 cell lines
Contact List
Boris Zybaylov
contact affiliationUniversity of Arkansas for Medical Sciences, Department of Biochemistry and Molecular Biology
contact emailBLZybaylov@UAMS.EDU
lab head
Boris Zybailov
contact affiliationBiochemistry and Molecular Biology
contact emailboriszybailov@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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