PXD003441

PXD003441 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mouse retina proteomics
Description	Proteomic experiments were performed on the outer segment (OS) and the remaining retina (RR). For the OS proteomics, three biological replicates were performed for mouse at the age of P15, which included 24, 26 and 26 retinas respectively. We also performed the OS proteomic experiment on 40 retinas from mice at age P13. For the RR proteomic experiments, two biological replicates were performed independently using 30 and 30 retinas respectively.
HostingRepository	PRIDE
AnnounceDate	2016-02-26
AnnouncementXML	Submission_2016-02-26_02:01:32.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Li Zhao
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; phosphorylated residue; carbamoylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-01-11 02:11:48	ID requested
⏵ 1	2016-02-26 02:01:33	announced

Publication List

Zhao L, Chen Y, Bajaj AO, Eblimit A, Xu M, Soens ZT, Wang F, Ge Z, Jung SY, He F, Li Y, Wensel TG, Qin J, Chen R, Integrative subcellular proteomic analysis allows accurate prediction of human disease-causing genes. Genome Res, 26(5):660-9(2016) [pubmed]

Zhao L, Chen Y, Bajaj AO, Eblimit A, Xu M, Soens ZT, Wang F, Ge Z, Jung SY, He F, Li Y, Wensel TG, Qin J, Chen R, Integrative subcellular proteomic analysis allows accurate prediction of human disease-causing genes. Genome Res, 26(5):660-9(2016) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Mouse retina, photoreceptor, outer segment

curator keyword: Biological

submitter keyword: Mouse retina, photoreceptor, outer segment

Contact List

Rui Chen
contact affiliation	HGSC, Baylor College of Medicine
contact email	ruichen@bcm.edu
lab head
Li Zhao
contact affiliation	Baylor College of Medicine
contact email	myth.zhao@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/02/PXD003441
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/02/PXD003441

PRIDE project URI

Repository Record List

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