PXD003422 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | A proteomics approach to the protein normalization problem |
Description | The approach suggested here can be used more widely to determine the suitability of proteins or sets of proteins as loading and normalization controls for any biological system. As we have shown here, historically selected ‘household proteins’ may not be the most suitable for this task for technical or biological reasons. Conversely, expression data across diverse systems can inform the selection of proteins to serve as a biomarker. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:27:08.547.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Jacek Wisniewski |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-01-05 23:49:44 | ID requested | |
1 | 2016-06-20 00:52:03 | announced | |
⏵ 2 | 2024-10-22 04:27:16 | announced | 2024-10-22: Updated project metadata. |
Publication List
Wi, ś, niewski JR, Mann M, A Proteomics Approach to the Protein Normalization Problem: Selection of Unvarying Proteins for MS-Based Proteomics and Western Blotting. J Proteome Res, 15(7):2321-6(2016) [pubmed] |
Keyword List
curator keyword: Technical |
submitter keyword: Data normalization |
Contact List
Jacek R Wisniewski |
contact affiliation | Max Planck Institute of Biochemistry. Martinsried, Germany |
contact email | jwisniew@biochem.mpg.de |
lab head | |
Jacek Wisniewski |
contact affiliation | Proteomics |
contact email | jwisniew@biochem.mpg.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD003422 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003422
- Label: PRIDE project
- Name: A proteomics approach to the protein normalization problem