PXD003422

PXD003422 is an original dataset announced via ProteomeXchange.

Title	A proteomics approach to the protein normalization problem
Description	The approach suggested here can be used more widely to determine the suitability of proteins or sets of proteins as loading and normalization controls for any biological system. As we have shown here, historically selected ‘household proteins’ may not be the most suitable for this task for technical or biological reasons. Conversely, expression data across diverse systems can inform the selection of proteins to serve as a biomarker.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:27:08.547.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jacek Wisniewski
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2016-01-05 23:49:44	ID requested
1	2016-06-20 00:52:03	announced
⏵ 2	2024-10-22 04:27:16	announced	2024-10-22: Updated project metadata.

Wi, ś, niewski JR, Mann M, A Proteomics Approach to the Protein Normalization Problem: Selection of Unvarying Proteins for MS-Based Proteomics and Western Blotting. J Proteome Res, 15(7):2321-6(2016) [pubmed]

curator keyword: Technical

submitter keyword: Data normalization

Jacek R Wisniewski
contact affiliation	Max Planck Institute of Biochemistry. Martinsried, Germany
contact email	jwisniew@biochem.mpg.de
lab head
Jacek Wisniewski
contact affiliation	Proteomics
contact email	jwisniew@biochem.mpg.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD003422

PRIDE project URI

• PRIDE
  1. PXD003422
     1. Label: PRIDE project
     2. Name: A proteomics approach to the protein normalization problem