PXD003338

PXD003338 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Dynamic proteome profiling of human induced pluripotent stem cell-derived pancreatic progenitors
Description	Quantitative description of proteome dynamics during in vitro differentiation of hiPSCs towards pancreatic progenitor cells, providing time-specific protein signatures.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:25:02.120.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Heidrun Vethe
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-12-14 06:22:13	ID requested
1	2021-08-30 01:22:07	announced
⏵ 2	2024-10-22 05:25:04	announced	2024-10-22: Updated project metadata.

Publication List

10.1002/stem.3135;
Loo LSW, Vethe H, Soetedjo AAP, Paulo JA, Jasmen J, Jackson N, Bj, ø, rlykke Y, Valdez IA, Vaudel M, Barsnes H, Gygi SP, Raeder H, Teo AKK, Kulkarni RN, Dynamic proteome profiling of human pluripotent stem cell-derived pancreatic progenitors. Stem Cells, 38(4):542-555(2020) [pubmed]

10.1002/stem.3135;

Loo LSW, Vethe H, Soetedjo AAP, Paulo JA, Jasmen J, Jackson N, Bj, ø, rlykke Y, Valdez IA, Vaudel M, Barsnes H, Gygi SP, Raeder H, Teo AKK, Kulkarni RN, Dynamic proteome profiling of human pluripotent stem cell-derived pancreatic progenitors. Stem Cells, 38(4):542-555(2020) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: and mass spectrometry,human induced pluripotent stem cells, proteomics, pancreatic progenitors, differentiation, time course, quantitative dynamics

curator keyword: Biomedical

submitter keyword: and mass spectrometry,human induced pluripotent stem cells, proteomics, pancreatic progenitors, differentiation, time course, quantitative dynamics

Contact List

Helge Ræder
contact affiliation	KG Jebsen Center for Diabetes Research, Department of Clinical Science, University of Bergen, Norway. Department of Pediatrics, Haukeland University Hospital, Bergen, Norway.
contact email	helge.rader@uib.no
lab head
Heidrun Vethe
contact affiliation	Universitetet i Bergen
contact email	heidrun.vethe@uib.no
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD003338
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD003338

PRIDE project URI

Repository Record List

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