PXD003266

PXD003266 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	mouse liver SWATH-MS - Systems proteomics of liver mitochondria function
Description	Here, we have profiled 386 individuals in 80 cohorts of the BXD mouse genetic reference population across two environmental states through a metabolic phenotyping program including glucose response, exercise capacity, and cold response. To understand how the observed phenotypic differences are related to genetic variance, we generated a multilayered set of molecular phenotypes—genomics, transcriptomics, proteomics, and metabolomics across all cohorts, then modeled these molecular patterns with the phenotypic variance.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:27:01.881.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yibo Wu
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-12-02 00:37:53	ID requested
1	2016-06-13 01:07:14	announced
⏵ 2	2024-10-22 04:27:10	announced	2024-10-22: Updated project metadata.

Publication List

Williams EG, Wu Y, Jha P, Dubuis S, Blattmann P, Argmann CA, Houten SM, Amariuta T, Wolski W, Zamboni N, Aebersold R, Auwerx J, Systems proteomics of liver mitochondria function. Science, 352(6291):aad0189(2016) [pubmed]
10.1126/science.aad0189;

Williams EG, Wu Y, Jha P, Dubuis S, Blattmann P, Argmann CA, Houten SM, Amariuta T, Wolski W, Zamboni N, Aebersold R, Auwerx J, Systems proteomics of liver mitochondria function. Science, 352(6291):aad0189(2016) [pubmed]

10.1126/science.aad0189;

Keyword List

curator keyword: Biological
submitter keyword: mouse liver, SWATH-MS

curator keyword: Biological

submitter keyword: mouse liver, SWATH-MS

Contact List

Ruedi Aebersold
contact affiliation	IMSB, ETH Zurich, Switzerland
contact email	aebersold@imsb.biol.ethz.ch
lab head
Yibo Wu
contact affiliation	Biology
contact email	wu@imsb.biol.ethz.ch
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD003266
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD003266

PRIDE project URI

Repository Record List

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