PXD003233

PXD003233 is an original dataset announced via ProteomeXchange.

Title	SILAC analysis of ptp-3 knockout in C. elegans
Description	A ptp-3 mutant and wildtype C. elegans were SILAC labeled and subjected to whole proteome analysis and phosphotyrosine enrichment.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:27:01.619.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Akhilesh Pandey
SpeciesList	scientific name: Caenorhabditis elegans; NCBI TaxID: 6239;
ModificationList	deaminated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2015-11-25 01:46:40	ID requested
1	2016-12-20 17:49:34	announced
2	2017-10-24 02:49:21	announced	Updated project metadata.
⏵ 3	2024-10-22 04:27:03	announced	2024-10-22: Updated project metadata.

10.1016/j.molonc.2016.03.003;

Mitchell CJ, Kim MS, Zhong J, Nirujogi RS, Bose AK, Pandey A, Unbiased identification of substrates of protein tyrosine phosphatase ptp-3 in C. elegans. Mol Oncol, 10(6):910-20(2016) [pubmed]

curator keyword: Biological

submitter keyword: phosoproteomics, C. elegans,SILAC

Akhilesh Pandey
contact affiliation	McKusick Nathans Institute of Genetics and Departments of Biological Chemistry, Pathology and Oncology, Johns Hopkins University School of Medicine, Baltimore, MD 21205
contact email	pandey@jhmi.edu
lab head
Akhilesh Pandey
contact affiliation	Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905
contact email	pandey.akhilesh@mayo.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD003233

PRIDE project URI

• PRIDE
  1. PXD003233
     1. Label: PRIDE project
     2. Name: SILAC analysis of ptp-3 knockout in C. elegans