PXD003123 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteome profiling of Rhodobacter capsulatus wild type and a ΔmodABC mutant in response to molybdenum |
Description | The diazotrophic bacterium Rhodobacter capsulatus is able to synthesize two nitrogenases, a molybdenum-dependent and an alternative Mo-free iron-only nitrogenase, enabling growth with molecular dinitrogen (N2) as sole nitrogen source. The Mo response of the wild type and a mutant lacking the high-affinity molybdate transporter, ModABC, were analyzed by proteome profiling. |
HostingRepository | PRIDE |
AnnounceDate | 2015-12-14 |
AnnouncementXML | Submission_2015-12-14_08:34:17.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sina Schäkermann |
SpeciesList | scientific name: Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003); NCBI TaxID: 272942; |
ModificationList | deamidated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Synapt MS |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2015-10-30 03:07:31 | ID requested | |
⏵ 1 | 2015-12-14 08:34:18 | announced | |
Publication List
Hoffmann MC, Wagner E, Langklotz S, Pf, ä, nder Y, H, ö, tt S, Bandow JE, Masepohl B, Proteome Profiling of the Rhodobacter capsulatus Molybdenum Response Reveals a Role of IscN in Nitrogen Fixation by Fe-Nitrogenase. J Bacteriol, 198(4):633-43(2015) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Rhodobacter capsulatus molybdenum LC-MS proteomics MSE |
Contact List
Julia Elisabeth Bandow |
contact affiliation | Ruhr-Universität Bochum AG Angewandte Mikrobiologie Universitätsstraße 150 44780 Bochum Raum: ND 06/748 Tel.: +49 234 32 23102 |
contact email | julia.bandow@rub.de |
lab head | |
Sina Schäkermann |
contact affiliation | Ruhr-Universität Bochum |
contact email | Sina.Langklotz@rub.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/12/PXD003123 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003123
- Label: PRIDE project
- Name: Proteome profiling of Rhodobacter capsulatus wild type and a ΔmodABC mutant in response to molybdenum