PXD003115

PXD003115 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	PGRC Cancer Proteome Study of Gastric Tissue
Description	The goal of the project is to analyze different layers of proteome information including protein abundance and post-translational modifications of PGRC gastric tissue samples. Three pairs of human gastric cancer and adjacent normal tissues were extensively characterized by serial enrichments of phosphorylation and N-glycosylation (SEPG) coupled to LC-MS/MS method.
HostingRepository	PRIDE
AnnounceDate	2016-03-18
AnnouncementXML	Submission_2016-03-18_09:20:00.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Dong-Gi Mun
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	deamidated residue; monohydroxylated residue; iodoacetamide derivatized residue; phosphorylated residue; iTRAQ4plex-116 reporter+balance reagent acylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-10-28 04:04:44	ID requested
⏵ 1	2016-03-18 09:20:01	announced

Publication List

Park JM, Park JH, Mun DG, Bae J, Jung JH, Back S, Lee H, Kim H, Jung HJ, Kim HK, Lee H, Kim KP, Hwang D, Lee SW, Integrated analysis of global proteome, phosphoproteome, and glycoproteome enables complementary interpretation of disease-related protein networks. Sci Rep, 5():18189(2015) [pubmed]

Park JM, Park JH, Mun DG, Bae J, Jung JH, Back S, Lee H, Kim H, Jung HJ, Kim HK, Lee H, Kim KP, Hwang D, Lee SW, Integrated analysis of global proteome, phosphoproteome, and glycoproteome enables complementary interpretation of disease-related protein networks. Sci Rep, 5():18189(2015) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: Human, Early Onset Gastric Cancer, Multi-dimenstional proteome analysis, LC-MSMS

curator keyword: Biomedical

submitter keyword: Human, Early Onset Gastric Cancer, Multi-dimenstional proteome analysis, LC-MSMS

Contact List

Sang-Won Lee
contact affiliation	Department of Chemistry, Korea University
contact email	sw_lee@korea.ac.kr
lab head
Dong-Gi Mun
contact affiliation	Korea University
contact email	cacagong@korea.ac.kr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/03/PXD003115
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/03/PXD003115

PRIDE project URI

Repository Record List

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