PXD003098 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | In vivo trapping of thioredoxin substrates |
Description | Thioredoxin (Trx) is a ubiquitous oxidoreductase maintaining protein-bound cysteine residues in the reduced thiol state. Here, we combined a well-established method to trap Trx substrates with the power of bacterial genetics to comprehensively characterize the in vivo Trx redox interactome in the model bacterium Escherichia coli. Using strains engineered to optimize trapping, we report the identification of a total 257 Trx substrates, including 191 that had never been reported to depend on Trx for reduction. The newly identified Trx substrates are involved in a variety of cellular processes, ranging from energy metabolism to amino acid synthesis and transcription. The interaction between Trx and two of its newly identified substrates, a protein required for the import of most carbohydrates, PtsI, and the bacterial actin homolog MreB was studied in detail. We provide direct evidence that PtsI and MreB contain cysteine residues that are susceptible to oxidation and that participate in the formation of an intermolecular disulfide with Trx. By considerably expanding the number of Trx targets, our work highlights the role played by this major oxidoreductase in a variety of cellular processes. Moreover, as the dependence on Trx for reduction is often conserved across species, it also provides insightful information on the interactome of Trx in organisms other than E. coli |
HostingRepository | PRIDE |
AnnounceDate | 2016-04-19 |
AnnouncementXML | Submission_2016-04-19_09:59:49.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Didier Vertommen |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | LTQ |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2015-10-22 02:50:24 | ID requested | |
⏵ 1 | 2016-04-19 09:59:50 | announced | |
Publication List
Arts IS, Vertommen D, Baldin F, Laloux G, Collet JF, Comprehensively Characterizing the Thioredoxin Interactome In Vivo Highlights the Central Role Played by This Ubiquitous Oxidoreductase in Redox Control. Mol Cell Proteomics, 15(6):2125-40(2016) [pubmed] |
Keyword List
submitter keyword: TRX1, substrates, E. Coli |
Contact List
Jean-François Collet |
contact affiliation | UCL - de Duve Institute - Brussels Center for Redox Biology, 1200 Brussels Belgium |
contact email | jfcollet@uclouvain.be |
lab head | |
Didier Vertommen |
contact affiliation | UCL - de Duve Institute, Brussels Belgium |
contact email | didier.vertommen@uclouvain.be |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003098
- Label: PRIDE project
- Name: In vivo trapping of thioredoxin substrates