PXD002961

PXD002961 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Yersinia pestis Yp2126 laboratory domestication
Description	Project goal is to describe proteomic changes arising from adaptation to laboratory culture conditions.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:26:20.257.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Owen Leiser
SpeciesList	scientific name: Yersinia pestis CO92; NCBI TaxID: 214092;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-09-23 03:07:41	ID requested
1	2016-01-12 03:27:13	announced
⏵ 2	2024-10-22 04:26:28	announced	2024-10-22: Updated project metadata.

Publication List

10.1371/journal.pone.0142997;
Leiser OP, Merkley ED, Clowers BH, Deatherage Kaiser BL, Lin A, Hutchison JR, Melville AM, Wagner DM, Keim PS, Foster JT, Kreuzer HW, Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach. PLoS One, 10(11):e0142997(2015) [pubmed]

10.1371/journal.pone.0142997;

Leiser OP, Merkley ED, Clowers BH, Deatherage Kaiser BL, Lin A, Hutchison JR, Melville AM, Wagner DM, Keim PS, Foster JT, Kreuzer HW, Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach. PLoS One, 10(11):e0142997(2015) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Yersinia pestis evolution adaptation

curator keyword: Biological

submitter keyword: Yersinia pestis evolution adaptation

Contact List

Helen Kreuzer
contact affiliation	Pacific Northwest National Laboratory, Richland WA USA
contact email	Helen.Kreuzer@pnnl.gov
lab head
Owen Leiser
contact affiliation	Pacific Northwest National Laboratory
contact email	Owen.Leiser@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/01/PXD002961
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/01/PXD002961

PRIDE project URI

Repository Record List

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