PXD002908

PXD002908 is an original dataset announced via ProteomeXchange.

Title	Extensive proteomic approaches to identify glycosylphosphatidylinositol-anchored proteins in Arabidopsis reveal their diverse responses to cold acclimation
Description	When plants are exposed to non-freezing low temperatures, they can increase their freezing tolerance (cold acclimation, CA). Changes of plasma membrane (PM) and sterol/sphingolipid-enriched microdomain proteins are thought to be crucial for acquisition of freezing tolerance. Particularly, glycosylphosphatidylinositol-anchored proteins (GPI-APs), which are lipid-modified proteins and potentially targeted to PM surface and apoplast, are deeply-involved in microdomain functions. However, GPI-AP functions in the CA mechanisms are not yet characterized. In present study, we conducted large-scale proteomics to investigate CA-induced GPI-APs in Arabidopsis leaves.
HostingRepository	PRIDE
AnnounceDate	2016-07-29
AnnouncementXML	Submission_2016-08-02_05:57:13.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD002908
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Daisuke Takahashi
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2015-09-14 08:01:02	ID requested
1	2016-07-29 06:19:47	announced
⏵ 2	2016-08-02 05:57:14	announced	Updated publication reference for PubMed record(s): 27471282.

Takahashi D, Kawamura Y, Uemura M, Cold acclimation is accompanied by complex responses of glycosylphosphatidylinositol (GPI)-anchored proteins in Arabidopsis. J Exp Bot, 67(17):5203-15(2016) [pubmed]

curator keyword: Biological

submitter keyword: Cold acclimation, Freezing tolerance, GPI-anchored protein, Arabidopsis, Plasma membrane, Microdomain, Detergent-resistant membrane, Apoplast

Matsuo Uemura
contact affiliation	Cryobiofrontier Research Center, Iwate University, Japan
contact email	uemura@iwate-u.ac.jp
lab head
Daisuke Takahashi
contact affiliation	Max-Planck Institute of Molecular Plant Physiology
contact email	dtakahashi@mpimp-golm.mpg.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/07/PXD002908

PRIDE project URI

• PRIDE
  1. PXD002908
     1. Label: PRIDE project
     2. Name: Extensive proteomic approaches to identify glycosylphosphatidylinositol-anchored proteins in Arabidopsis reveal their diverse responses to cold acclimation