PXD002865

PXD002865 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pseudomonas aeruginosa cystic fibrosis strains share a core proteome
Description	The opportunistic pathogen Pseudomonas aeruginosa is among the main colonizers of the lungs of cystic fibrosis (CF) patients. We have isolated and sequenced several P. aeruginosa isolates from the sputum of CF patients and used phenotypic, genomic and proteomic analyses to compare these CF derived strains with each other and with the model strain PAO1.
HostingRepository	PRIDE
AnnounceDate	2015-10-14
AnnouncementXML	Submission_2015-10-14_06:22:47.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Christoph Krisp
SpeciesList	scientific name: Pseudomonas aeruginosa PAO1; NCBI TaxID: 208964;
ModificationList	iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-09-07 03:23:19	ID requested
⏵ 1	2015-10-14 06:22:58	announced

Publication List

Penesyan A, Kumar SS, Kamath K, Shathili AM, Venkatakrishnan V, Krisp C, Packer NH, Molloy MP, Paulsen IT, Genetically and Phenotypically Distinct Pseudomonas aeruginosa Cystic Fibrosis Isolates Share a Core Proteomic Signature. PLoS One, 10(10):e0138527(2015) [pubmed]

Penesyan A, Kumar SS, Kamath K, Shathili AM, Venkatakrishnan V, Krisp C, Packer NH, Molloy MP, Paulsen IT, Genetically and Phenotypically Distinct Pseudomonas aeruginosa Cystic Fibrosis Isolates Share a Core Proteomic Signature. PLoS One, 10(10):e0138527(2015) [pubmed]

Keyword List

curator keyword: Biomedical, Biological
submitter keyword: secondary metabolites
virulence
motility
biofilms
genomics
proteomics
metabolic profile
SWATH-MS
Multiphase LCMS/MS

curator keyword: Biomedical, Biological

submitter keyword: secondary metabolites

virulence

motility

biofilms

genomics

proteomics

metabolic profile

SWATH-MS

Multiphase LCMS/MS

Contact List

Ian Paulsen
contact affiliation	Department of Chemistry and Biomolecular Sciences Faculty of Science and Engineering Macquarie University Sydney, New South Wales, Australia
contact email	ian.paulsen@mq.edu.au
lab head
Christoph Krisp
contact affiliation	Australian Proteome Analysis Facility (APAF)
contact email	ckrisp@proteome.org.au
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/10/PXD002865
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/10/PXD002865

PRIDE project URI

Repository Record List

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