PXD002856

PXD002856 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Soybean, Root, LC-MSMS
Description	In the current study, we compared phosphoproteomic and proteomic changes in roots of different soybean seedlings of a salt-tolerant cultivar (Wenfeng07) and a salt-sensitive cultivar (Union85140) induced by salt stress. The root samples of Wenfeng07 and Union85140 at three-trifoliate stage were collected at 0 hr, 0.5 hr, 1 hr, 4 hrs, 12 hrs, 24 hrs and 48 hrs after been treated with 150 mM NaCl. LC-MS/MS based phosphoproteomic analysis of these samples identified a total of 2692 phosphoproteins and 5509 phosphorylation sites. Of these, 2344 phosphoproteins containing 3744 phosphorylation sites were quantitatively analyzed. Our results showed that 1163 phosphorylation sites were differentially phosphorylated in the two compared cultivars.
HostingRepository	PRIDE
AnnounceDate	2015-10-01
AnnouncementXML	Submission_2015-10-01_00:01:07.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Erxu Pi
SpeciesList	scientific name: Glycine soja (Wild soybean); NCBI TaxID: 3848;
ModificationList	phosphorylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-09-07 00:48:09	ID requested
⏵ 1	2015-10-01 00:01:09	announced

Publication List

Pi E, Qu L, Hu J, Huang Y, Qiu L, Lu H, Jiang B, Liu C, Peng T, Zhao Y, Wang H, Tsai SN, Ngai S, Du L, Mechanisms of Soybean Roots' Tolerances to Salinity Revealed by Proteomic and Phosphoproteomic Comparisons Between Two Cultivars. Mol Cell Proteomics, 15(1):266-88(2016) [pubmed]

Pi E, Qu L, Hu J, Huang Y, Qiu L, Lu H, Jiang B, Liu C, Peng T, Zhao Y, Wang H, Tsai SN, Ngai S, Du L, Mechanisms of Soybean Roots' Tolerances to Salinity Revealed by Proteomic and Phosphoproteomic Comparisons Between Two Cultivars. Mol Cell Proteomics, 15(1):266-88(2016) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Soybean, Root, LC-MSMS, Salinity stress

curator keyword: Biological

submitter keyword: Soybean, Root, LC-MSMS, Salinity stress

Contact List

Erxu Pi
contact affiliation	Hangzhou Normal University
contact email	pierzaixian001@aliyun.com
lab head
Erxu Pi
contact affiliation	Hangzhou Normal University
contact email	pierzaixian001@aliyun.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/10/PXD002856
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/10/PXD002856

PRIDE project URI

Repository Record List

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