PXD002806

PXD002806 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis of Rhizoctonia solani
Description	Rhizoctonia solani is an important root infecting pathogen of a range of food staples worldwide including wheat, rice, maize, soybean, potato and others. Conventional resistance breeding strategies are hindered by the absence of tractable genetic resistance in any crop host. Understanding the biology and pathogenicity mechanisms of this fungus is important for addressing these disease issues however, little is known about how R. solani causes disease. This study capitalises on recent genomic studies by applying mass spectrometry based proteomics to identify soluble, membrane-bound and culture filtrate proteins produced under wheat infection and vegetative growth conditions. Many of the proteins found in the culture filtrate had predicted functions relating to modification of the plant cell wall, a major activity required for pathogenesis on the plant host, including a number found only under infection conditions. Other infection related proteins included a high proportion of proteins with redox associated functions and many novel proteins without functional classification.
HostingRepository	PRIDE
AnnounceDate	2016-01-28
AnnouncementXML	Submission_2016-01-28_03:12:24.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD002806
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jonathan Anderson
SpeciesList	scientific name: Rhizoctonia solani AG-8 WAC10335; NCBI TaxID: 1287689;
ModificationList	deamidated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2015-08-27 04:09:43	ID requested
⏵ 1	2016-01-28 03:12:25	announced

Anderson JP, Hane JK, Stoll T, Pain N, Hastie ML, Kaur P, Hoogland C, Gorman JJ, Singh KB, Proteomic Analysis of Rhizoctonia solani Identifies Infection-specific, Redox Associated Proteins and Insight into Adaptation to Different Plant Hosts. Mol Cell Proteomics, 15(4):1188-203(2016) [pubmed]

curator keyword: Biological

submitter keyword: Rhizoctonia solani, wheat, proteomics, pathogen

Karam Singh
contact affiliation	CSIRO Agriculture, Western Australia
contact email	Karam.Singh@csiro.au
lab head
Jonathan Anderson
contact affiliation	CSIRO
contact email	jonathan.anderson@csiro.au
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD002806
     1. Label: PRIDE project
     2. Name: Proteomic analysis of Rhizoctonia solani