PXD002523

PXD002523 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Human lung adenocarcinoma tissue LC-MS/MS
Description	This project is a report of a chromosome-based human proteome project focused on chromosome 9 (Chr 9). To reveal missing proteins and undiscovered features in proteomes, LC-MS/MS analysis based identification and characterization were conducted on 5 pairs of lung adenocarcinoma tumors and adjacent non-tumor tissues.
HostingRepository	PRIDE
AnnounceDate	2015-07-31
AnnouncementXML	Submission_2015-11-25_05:50:06.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD002523
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Je-Yoel Cho
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Oxidation; Dehydrated; Ammonia-loss; Acetyl; Carbamidomethyl; Deamidated
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-07-13 00:55:07	ID requested
1	2015-07-31 07:49:39	announced
2	2015-08-03 06:52:22	announced	Updated publication details.
⏵ 3	2015-11-25 05:50:07	announced	Updated publication details.

Publication List

Kim YI, Lee J, Choi YJ, Seo J, Park J, Lee SY, Cho JY, Proteogenomic Study beyond Chromosome 9: New Insight into Expressed Variant Proteome and Transcriptome in Human Lung Adenocarcinoma Tissues. J Proteome Res, 14(12):5007-16(2015) [pubmed]

Kim YI, Lee J, Choi YJ, Seo J, Park J, Lee SY, Cho JY, Proteogenomic Study beyond Chromosome 9: New Insight into Expressed Variant Proteome and Transcriptome in Human Lung Adenocarcinoma Tissues. J Proteome Res, 14(12):5007-16(2015) [pubmed]

Keyword List

ProteomeXchange project tag: Chromosome-centric Human Proteome Project (C-HPP), Human Proteome Project
curator keyword: Biomedical
submitter keyword: Human, Lung, Adenocrcinoma, Adjacent normal, Tissue

ProteomeXchange project tag: Chromosome-centric Human Proteome Project (C-HPP), Human Proteome Project

curator keyword: Biomedical

submitter keyword: Human, Lung, Adenocrcinoma, Adjacent normal, Tissue

Contact List

Je-Yoel Cho
contact affiliation	Seoul National University
contact email	jeycho@snu.ac.kr
lab head
Je-Yoel Cho
contact affiliation	Seoul National University
contact email	jeycho@snu.ac.kr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/07/PXD002523
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/07/PXD002523

PRIDE project URI

Repository Record List

[ + ]