PXD002472

PXD002472 is an original dataset announced via ProteomeXchange.

Title	Proteomic study of S erythrea bioprocess
Description	Proteome composition of Saccharopolyspora erythrea during the fermentation bioprocess was studied. Samples were collected at two timepoints (prior to the rapid growth phase and at the start of the rapid growth phase), and relative differences in protein abundance were determined by spectral counting.
HostingRepository	PRIDE
AnnounceDate	2017-10-24
AnnouncementXML	Submission_2017-10-24_05:53:01.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Marko Fonovic
SpeciesList	scientific name: Saccharopolyspora erythraea (Streptomyces erythraeus); NCBI TaxID: 1836;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2015-07-03 03:10:34	ID requested
1	2016-05-26 09:30:35	announced
2	2016-06-08 01:03:49	announced	Updated publication reference for PubMed record(s): 27255285.
3	2017-06-20 05:43:24	announced	Updated project metadata.
⏵ 4	2017-10-24 05:53:02	announced	Updated project metadata.

Karni, č, ar K, Drobnak I, Petek M, Magdevska V, Horvat J, Vidmar R, Baebler Š, Rotter A, Jamnik P, Fujs Š, Turk B, Fonovi, č M, Gruden K, Kosec G, Petkovi, ć H, Integrated omics approaches provide strategies for rapid erythromycin yield increase in Saccharopolyspora erythraea. Microb Cell Fact, 15():93(2016) [pubmed]

curator keyword: Biological

submitter keyword: Saccharopolyspora erythrea, bioprocess, LC-MS/MS

Marko Fonovic
contact affiliation	Department of Biochemistry, Molecular and Structural Biology, Jozef Stefan Institute, Ljubljana, Slovenia
contact email	marko.fonovic@ijs.si
lab head
Marko Fonovic
contact affiliation	Jozef Stefan Institute
contact email	marko.fonovic@ijs.si
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/05/PXD002472

PRIDE project URI

• PRIDE
  1. PXD002472
     1. Label: PRIDE project
     2. Name: Proteomic study of S erythrea bioprocess