PXD002439 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | HLA-DR peptides from human BAL and EBV-transformed B cells |
Description | Optimization of the protocols for isolation HLA-DR (MHCII) peptides from human BAL. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:06:04.287.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Jimmy Ytterberg |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | Deamidated; Oxidation; Gln->pyro-Glu |
Instrument | LTQ Orbitrap Velos; Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2015-06-29 02:19:23 | ID requested | |
1 | 2016-08-08 12:54:21 | announced | |
2 | 2016-10-27 04:00:45 | announced | Updated project metadata. |
⏵ 3 | 2024-10-22 04:06:06 | announced | 2024-10-22: Updated project metadata. |
Publication List
Heyder T, Kohler M, Tarasova NK, Haag S, Rutishauser D, Rivera NV, Sandin C, Mia S, Malmstr, ö, m V, Wheelock Å M, Wahlstr, ö, m J, Holmdahl R, Eklund A, Zubarev RA, Grunewald J, Ytterberg AJ, Approach for Identifying Human Leukocyte Antigen (HLA)-DR Bound Peptides from Scarce Clinical Samples. Mol Cell Proteomics, 15(9):3017-29(2016) [pubmed] |
Keyword List
ProteomeXchange project tag: Human Immuno-Peptidome Project (HUPO-HIPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project |
curator keyword: Technical, Biomedical |
submitter keyword: BAL, Sarcoidosis,HLA-DR peptides |
Contact List
Roman A. Zubarev |
contact affiliation | Division of Chemistry I, Department of Medical Biochemistry & Biophysics Karolinska Institutet Stockholm, Sweden |
contact email | Roman.Zubarev@ki.se |
lab head | |
Jimmy Ytterberg |
contact affiliation | Department of Medicine, Solna, Karolinska Institutet, Stockholm, Sweden |
contact email | jimmy.ytterberg@sobi.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/08/PXD002439 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD002439
- Label: PRIDE project
- Name: HLA-DR peptides from human BAL and EBV-transformed B cells