PXD002431

PXD002431 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Analytical framework for peptidomics applied to large scale neuropeptide identification
Description	Endogenous peptides are extracted and seperated with nLC with HCD fragmentation on a LTQ Orbitrap Velos. Data analysis was done with Mascot and MaxQuant
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:05:54.506.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Christian Kelstrup
SpeciesList	scientific name: Rattus rattus (Black rat); NCBI TaxID: 10117;
ModificationList	amidated residue; phosphorylated residue; acetylated residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-06-26 06:32:38	ID requested
1	2016-05-03 05:06:54	announced
2	2016-05-09 03:28:01	announced	Updated publication reference for PubMed record(s): 27142507.
⏵ 3	2024-10-22 04:05:57	announced	2024-10-22: Updated project metadata.

Publication List

Secher A, Kelstrup CD, Conde-Frieboes KW, Pyke C, Raun K, Wulff BS, Olsen JV, Analytic framework for peptidomics applied to large-scale neuropeptide identification. Nat Commun, 7():11436(2016) [pubmed]
10.1038/ncomms11436;

Secher A, Kelstrup CD, Conde-Frieboes KW, Pyke C, Raun K, Wulff BS, Olsen JV, Analytic framework for peptidomics applied to large-scale neuropeptide identification. Nat Commun, 7():11436(2016) [pubmed]

10.1038/ncomms11436;

Keyword List

ProteomeXchange project tag: PRIME-XS Project
curator keyword: Biological, Biomedical
submitter keyword: bioinformatic framework, neuropeptides,Peptidomics

ProteomeXchange project tag: PRIME-XS Project

curator keyword: Biological, Biomedical

submitter keyword: bioinformatic framework, neuropeptides,Peptidomics

Contact List

Jesper V. Olsen
contact affiliation	NNF Center for Protein Research, University of Copenhagen, Denmark
contact email	jesper.olsen@cpr.ku.dk
lab head
Christian Kelstrup
contact affiliation	University of Copenhagen
contact email	chdake@cpr.ku.dk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/05/PXD002431
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/05/PXD002431

PRIDE project URI

Repository Record List

[ + ]