PXD002178

PXD002178 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative analysis of temporal IP and cell lysate using SWATH-MS (2)
Description	We treated wildtype and RIP3 knockout L929 with TNF for 8 time points respectively, and used SWATH-MS to quantify dynamic proteomic change of these two cell lines under a serial TNF treatments.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:17:43.385.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Chuan-Qi Zhong
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-05-13 01:34:22	ID requested
1	2021-01-11 00:22:30	announced
⏵ 2	2024-10-22 05:17:44	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/nmeth.3593;
Li Y, Zhong CQ, Xu X, Cai S, Wu X, Zhang Y, Chen J, Shi J, Lin S, Han J, Group-DIA: analyzing multiple data-independent acquisition mass spectrometry data files. Nat Methods, 12(12):1105-6(2015) [pubmed]

10.1038/nmeth.3593;

Li Y, Zhong CQ, Xu X, Cai S, Wu X, Zhang Y, Chen J, Shi J, Lin S, Han J, Group-DIA: analyzing multiple data-independent acquisition mass spectrometry data files. Nat Methods, 12(12):1105-6(2015) [pubmed]

Keyword List

curator keyword: Biological, Biomedical
submitter keyword: Mouse, L929 cells, SWATH-MS

curator keyword: Biological, Biomedical

submitter keyword: Mouse, L929 cells, SWATH-MS

Contact List

Chuan-Qi Zhong
contact affiliation	Xiamen University
contact email	andyzcq@gmail.com
lab head
Chuan-Qi Zhong
contact affiliation	College of life Science
contact email	andyzcq@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/01/PXD002178
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/01/PXD002178

PRIDE project URI

Repository Record List

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