PXD002140

PXD002140 is an original dataset announced via ProteomeXchange.

Title	AG3C glucose starvation time course
Description	This data set consists of a long term glucose starvation time course of E. coli grown in minimal media for up to two weeks. Unlike previous studies of long term starvation,Our study focuses on the physiological response of E. Coli in stationary phase as a result of being starved for glucose, not on the genetic adaptation of E. coli to utilize alternative nutrients.
HostingRepository	PRIDE
AnnounceDate	2015-08-24
AnnouncementXML	Submission_2015-08-24_09:03:19.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	John Houser
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2015-05-05 05:17:31	ID requested
⏵ 1	2015-08-24 09:03:20	announced

Houser JR, Barnhart C, Boutz DR, Carroll SM, Dasgupta A, Michener JK, Needham BD, Papoulas O, Sridhara V, Sydykova DK, Marx CJ, Trent MS, Barrick JE, Marcotte EM, Wilke CO, Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation. PLoS Comput Biol, 11(8):e1004400(2015) [pubmed]

curator keyword: Biological

submitter keyword: Bacterial physiology, long term glucose starvation, multi-omic dataset

Claus O. Wilke
contact affiliation	Institute for Cellular and Molecular Biology, The University of Texas at Austin Center for Systems and Synthetic Biology, The University of Texas at Austin Center for Computational Biology and Bioinformatics, The University of Texas at Austin Faculty of Arts and Sciences Center for Systems Biology, Harvard University Department of Molecular Biosciences, The University of Texas at Austin
contact email	wilke@austin.utexas.edu
lab head
John Houser
contact affiliation	University of Texas
contact email	johnrhouser@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/08/PXD002140

PRIDE project URI

• PRIDE
  1. PXD002140
     1. Label: PRIDE project
     2. Name: AG3C glucose starvation time course