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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2015-09-21
  • AnnouncementXML: Submission_2015-09-21_06:54:46.xml
  • DigitalObjectIdentifier: http://dx.doi.org/10.6019/PXD002105
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Supported dataset by repository
  • PrimarySubmitter: Benjamin Neely
  • Title: California sea lion cerebrospinal fluid LC-MS/MS
  • Description: We conducted a pilot label-free LC-MS/MS study to profile and compare the cerebral spinal fluid from California sea lions with domoic acid toxicosis and without domoic acid toxicosis. CSF samples from a 8 animals with DAT and 3 controls were run on a nano LC-MS/MS (Triple TOF) and searched against a mammalian database.
  • SpeciesList: scientific name: Zalophus californianus (California sealion); NCBI TaxID: 9704;
  • ModificationList: Oxidation; Carbamidomethyl; Deamidated
  • Instrument: TripleTOF 5600

Dataset History

VersionDatetimeStatusChangeLog Entry
02015-04-27 02:46:06ID requested
12015-09-21 06:54:47announced

Publication List

  1. Neely BA, Soper JL, Gulland FM, Bell PD, Kindy M, Arthur JM, Janech MG, Proteomic analysis of cerebrospinal fluid in California sea lions (Zalophus californianus) with domoic acid toxicosis identifies proteins associated with neurodegeneration. Proteomics, 15(23-24):4051-63(2015) [pubmed]

Keyword List

  1. curator keyword: Biomedical, Biological
  2. submitter keyword: California sea lion, cerebrospinal fluid, domoic acid

Contact List

    Michael G. Janech
    • contact affiliation: Department of Medicine, Division of Nephrology, and Marine Biomedicine and Environmental Sciences, Medical University of South Carolina, Charleston, SC, USA
    • contact email: janechmg@musc.edu
    • lab head:
    Benjamin Neely
    • contact affiliation: Medical University of South Carolina
    • contact email: benaneely@gmail.com
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List

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