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PXD002001

PXD002001 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleHuman HeLa SILAC LC MS/MS - Hypoxia Strongly Affects Mitochondrial Ribosomal Proteins and Translocases, as Shown by Quantitative Proteomics of HeLa Cells
DescriptionHuman HeLa cells were either kept in a hypoxic environment or under normoxic conditions. 137 proteins were found to be regulated, with maximum alteration of 18-fold. In particular, three clusters of differentially regulated proteins were identified, showing significant up-regulation of glycolysis and down-regulation of mitochondrial ribosomal proteins and translocases. This interaction is likely orchestrated by HIF-1. We also investigated the effect of hypoxia on the cell cycle, which is arrested at a restriction point in G1, and shows a prolonged S phase under these conditions.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:18:40.971.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterChristian Koehler
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList(R)-5-oxo-1; acetylated residue; monohydroxylated residue; deamidated residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02015-03-31 06:06:37ID requested
12017-01-02 05:18:35announced
22017-10-24 04:12:50announcedUpdated project metadata.
32024-10-22 04:18:42announced2024-10-22: Updated project metadata.
Publication List
10.1155/2015/678527;
Bousquet PA, Sandvik JA, Arntzen M Ø, Jeppesen Edin NF, Christoffersen S, Krengel U, Pettersen EO, Thiede B, Hypoxia Strongly Affects Mitochondrial Ribosomal Proteins and Translocases, as Shown by Quantitative Proteomics of HeLa Cells. Int J Proteomics, 2015():678527(2015) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: Human, hypoxia, HeLa SILAC, LC-MS/MS
Contact List
Bernd Thiede
contact affiliationUniversity of Oslo Department of Biosciences Cancer Proteomics P.O. Box 1066 Blindern, 0316 Oslo, Norway
contact emailbernd.thiede@biotek.uio.no
lab head
Christian Koehler
contact affiliationUiO
contact emailchristian.koehler@biotek.uio.no
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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