PXD001867

PXD001867 is an original dataset announced via ProteomeXchange.

Title	Yeast inter-species comparative proteomics
Description	Different yeast species in distinct clades within Saccharomycetaceae family are interesting model organisms for inter-species comparative proteomics, in regard to different metabolic properties and genomic architectures. The aim in this analysis is revealing conserved and diverse expression profile of proteome under different culture conditions, including fermentative and non-fermentative growth. Our label-free quantitative proteomics analysis not only uncovered species-specific characters of metabolic proteins expression pattern and also provide intriguing insight into optimized protein cost allocation and evolutionary role for duplicated genes.
HostingRepository	PRIDE
AnnounceDate	2015-11-17
AnnouncementXML	Submission_2015-11-16_18:13:11.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Keiji Kito
SpeciesList	scientific name: Lachancea waltii NCYC 2644; NCBI TaxID: 262981;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2015-03-04 12:22:57	ID requested
⏵ 1	2015-11-16 18:13:12	announced

Kito K, Ito H, Nohara T, Ohnishi M, Ishibashi Y, Takeda D, Yeast Interspecies Comparative Proteomics Reveals Divergence in Expression Profiles and Provides Insights into Proteome Resource Allocation and Evolutionary Roles of Gene Duplication. Mol Cell Proteomics, 15(1):218-35(2016) [pubmed]

curator keyword: Biological

submitter keyword: Yeast, Saccharomycetaceae family, comparative proteomics

Keiji Kito
contact affiliation	School of Agriculture, Meiji University
contact email	Kito@meiji.ac.jp
lab head
Keiji Kito
contact affiliation	Meiji University
contact email	kito@meiji.ac.jp
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/11/PXD001867

PRIDE project URI

• PRIDE
  1. PXD001867
     1. Label: PRIDE project
     2. Name: Yeast inter-species comparative proteomics