PXD001774

PXD001774 is an original dataset announced via ProteomeXchange.

Title	Proteomic Analysis to Reveal the Role of Phosphoproteins in Rice Nucleus during Early Stage of Germination
Description	Nucleus as the important subcellular organ of plant cell is responsible for storing most genetic information and controlling the plant's activities. Seed germination is an important stage for plant growth. To understand the role of nuclear protein and its phosphorylation during rice seed germination, gel free/label free proteomic technique was used
HostingRepository	PRIDE
AnnounceDate	2016-03-17
AnnouncementXML	Submission_2016-03-17_02:04:44.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	xiaojian Yin
SpeciesList	scientific name: Rice(O. sativa); NCBI TaxID: 4530;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue; phosphorylated residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2015-02-02 01:39:56	ID requested
⏵ 1	2016-03-17 02:04:45	announced

Li M, Yin X, Sakata K, Yang P, Komatsu S, Proteomic Analysis of Phosphoproteins in the Rice Nucleus During the Early Stage of Seed Germination. J Proteome Res, 14(7):2884-96(2015) [pubmed]

curator keyword: Biological

submitter keyword: rice, nucleus, phosphoproteomics, germination phosphonetwork

Professor Setsuko Komatsu
contact affiliation	NARO Institute of Crop Science
contact email	SKomatsu@affrc.go.jp
lab head
xiaojian Yin
contact affiliation	University of Tsukuba
contact email	xiaojian@affrc.go.jp
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/03/PXD001774

PRIDE project URI

• PRIDE
  1. PXD001774
     1. Label: PRIDE project
     2. Name: Proteomic Analysis to Reveal the Role of Phosphoproteins in Rice Nucleus during Early Stage of Germination