PXD001760

PXD001760 is an original dataset announced via ProteomeXchange.

Title	SWATH Analysis of Yeast Proteome over Time in Response to Osmotic Stress: SRM Dataset
Description	We sampled cell cultures in biological triplicates at six time points following the application of osmotic stress and acquired single injection DIA datasets on a high-resolution 5600 tripleTOF instrument operated in SWATH mode. To validate the protein fold changes obtained by SWATH-MS, we quantified a subset of 100 proteins in the 18 osmotic shock time course samples using SRM.
HostingRepository	PeptideAtlas
AnnounceDate	2015-01-29
AnnouncementXML	Submission_2015-01-29_13:07:55.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Lucia Espona Pernas
SpeciesList	scientific name: Saccharomyces cerevisiae; NCBI TaxID: 4932;
ModificationList	S-carboxamidomethyl-L-cysteine
Instrument	TSQ Vantage

Revision	Datetime	Status	ChangeLog Entry
0	2015-01-28 15:27:54	ID requested
⏵ 1	2015-01-29 13:07:56	announced

Selevsek N, Chang CY, Gillet LC, Navarro P, Bernhardt OM, Reiter L, Cheng LY, Vitek O, Aebersold R, Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry. Mol Cell Proteomics, 14(3):739-49(2015) [pubmed]

curator keyword: selected reaction monitoring, SRM, targeted

Lucia Espona Pernas
contact affiliation	IMSB ETH Zürich
contact email	espona@imsb.biol.ethz.ch
dataset submitter
Ruedi Aebersold
contact affiliation	IMSB ETH Zürich
contact email	aebersold@imbs.biol.ethz.ch
lab head

PeptideAtlas dataset URI

PASSEL experiment URI

PASSEL transition group browser URI