PXD001731

PXD001731 is an original dataset announced via ProteomeXchange.

Title	Large-Scale Targeted Proteomics Using Internal Standard Triggered-Parallel Reaction Monitoring
Description	Development, implementation, and evaluation of a new data acquisition scheme called internal standard triggered-parallel reaction monitoring (IS-PRM) to increase the scale of targeted quantitative experiments while retaining high detection and quantification performance. All the details about the dataset, the associated sample preparation and liquid chromatography coupled to tandem mass spectrometry methods, and the data processing procedures are provided in the manuscript by Gallien et al., entitled "Large-Scale Targeted Proteomics Using Internal Standard Triggered-Parallel Reaction Monitoring", Molecular and Cellular Proteomics.
HostingRepository	PRIDE
AnnounceDate	2016-02-09
AnnouncementXML	Submission_2016-03-16_06:17:55.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sebastien Gallien
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2015-01-26 01:42:46	ID requested
1	2016-02-09 01:46:09	announced
⏵ 2	2016-03-16 06:17:56	announced	Updated publication reference for PubMed record(s): 25755295.

Gallien S, Kim SY, Domon B, Large-Scale Targeted Proteomics Using Internal Standard Triggered-Parallel Reaction Monitoring (IS-PRM). Mol Cell Proteomics, 14(6):1630-44(2015) [pubmed]

curator keyword: Technical

submitter keyword: Targeted proteomics, parallel reaction monitoring, high resolution and accurate mass, real-time data analysis, remote control, quadrupole-orbitrap

Bruno Domon
contact affiliation	Luxembourg Clinical Proteomics Center, Luxembourg Institute of Health, Luxembourg
contact email	bdomon@crp-sante.lu
lab head
Sebastien Gallien
contact affiliation	Luxembourg Clinical Proteomics Center
contact email	sebastien.gallien@crp-sante.lu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/02/PXD001731

PRIDE project URI

• PRIDE
  1. PXD001731
     1. Label: PRIDE project
     2. Name: Large-Scale Targeted Proteomics Using Internal Standard Triggered-Parallel Reaction Monitoring