PXD001624

PXD001624 is an original dataset announced via ProteomeXchange.

Title	Response to phosphate limitation of Pseudovibrio sp. FO-BEG1, ICPL-LC-MS/MS, Cytoplasmatic proteome
Description	In this study we investigated the response of Pseudovibrio sp. FO-BEG1 to phosphate limitation. We compared the protein expression of strain FO-BEG1 under phosphate limited and phosphate surplus conditions. This dataset refers to the proteome analysis conducted on the cytoplasmatic proteins. An additional dataset for the extracellular and the membrane proteome is available. These two proteomes and the cytoplasmatic proteome were obtained from indipendent cultivation experiments.
HostingRepository	PRIDE
AnnounceDate	2016-06-24
AnnouncementXML	Submission_2016-06-24_09:42:10.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD001624
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Stefano Romano
SpeciesList	scientific name: Pseudovibrio sp. (strain FO-BEG1)�; NCBI TaxID: 911045;
ModificationList	S-pyridylethyl-L-cysteine; monohydroxylated residue; iodoacetamide derivatized residue; Bruker Daltonics SERVA-ICPL(TM) quantification chemistry: heavy form; O-(L-isoaspartyl)-L-threonine (active site intermediate); Bruker Daltonics SERVA-ICPL(TM) quantification chemistry: medium form - site N-term; Bruker Daltonics SERVA-ICPL(TM) quantification chemistry
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2014-12-19 01:40:31	ID requested
⏵ 1	2016-06-24 09:42:11	announced

Romano S, Schulz-Vogt HN, Gonz, á, lez JM, Bondarev V, Phosphate Limitation Induces Drastic Physiological Changes, Virulence-Related Gene Expression, and Secondary Metabolite Production in Pseudovibrio sp. Strain FO-BEG1. Appl Environ Microbiol, 81(10):3518-28(2015) [pubmed]

curator keyword: Biological

submitter keyword: ICPL, phosphate limitation, bacteria, Pseudovibrio, LC-MS/MS

Heide Schulz-Vogt
contact affiliation	Leibniz-Institut für Ostseeforschung
contact email	heide.schulz-vogt@io-warnemuende.de
lab head
Stefano Romano
contact affiliation	Biomerit Research center, UCC, Cork, Ireland
contact email	stefano.romano@ucc.ie
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD001624

PRIDE project URI

• PRIDE
  1. PXD001624
     1. Label: PRIDE project
     2. Name: Response to phosphate limitation of Pseudovibrio sp. FO-BEG1, ICPL-LC-MS/MS, Cytoplasmatic proteome