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PXD001567

PXD001567 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteomics Analysis of Soybean Hypocotyl during Recovery after Flooding Stress
DescriptionSoybean (Glycine max L. cv Enrei) seeds were sterilized with 2% sodium hypochlorite solution and then thoroughly rinsed in water. The sterilized seeds were sown 4 cm inside surface of sand in 450 mL of quartz seedling cases wetted with 150 mL water and grown at 25°C and 70% humidity in a growth chamber (Sanyo, Tokyo, Japan) under white fluorescent light (160 μmol m-2 s-1, 16 h light period/day). Two-day-old soybeans were flooded for 2 days and hypocotyl samples were collected at the day of removal of flooding and then at 2 more points during the 4-day recovery period.
HostingRepositoryPRIDE
AnnounceDate2015-05-26
AnnouncementXMLSubmission_2015-05-26_05:56:10.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMudassar Khan
SpeciesList scientific name: Glycine max (Soybean) (Glycine hispida); NCBI TaxID: 3847;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentLTQ XL
Dataset History
RevisionDatetimeStatusChangeLog Entry
02014-12-03 00:30:12ID requested
12015-05-26 05:56:11announced
Publication List
Khan MN, Sakata K, Komatsu S, Proteomic analysis of soybean hypocotyl during recovery after flooding stress. J Proteomics, 121():15-27(2015) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: proteomics, soybean, hypocotyl, flooding, recovery
Contact List
Setsuko Komatsu
contact affiliationNational Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba 305-8518, Japan
contact emailskomatsu@affrc.go.jp
lab head
Mudassar Khan
contact affiliationUniversity of Tsukuba
contact emailmnkhan@affrc.go.jp
dataset submitter
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Dataset FTP location
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