PXD001518

PXD001518 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Stone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes
Description	This project contributes to the proteomic comparison of different bacteria. A whole proteome catalogue was obtained for Modestobacter marinus grown in standard conditions.
HostingRepository	PRIDE
AnnounceDate	2015-09-07
AnnouncementXML	Submission_2015-09-07_06:18:12.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD001518
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Modestobacter marinus (strain BC501); NCBI TaxID: 1144889;
ModificationList	Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2014-11-20 06:17:31	ID requested
1	2015-08-03 03:23:45	announced
⏵ 2	2015-09-07 06:18:13	announced	Updated project metadata.

Publication List

Sghaier H, Hezbri K, Ghodhbane-Gtari F, Pujic P, Sen A, Daffonchio D, Boudabous A, Tisa LS, Klenk HP, Armengaud J, Normand P, Gtari M, Stone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes. ISME J, 10(1):21-9(2016) [pubmed]

Sghaier H, Hezbri K, Ghodhbane-Gtari F, Pujic P, Sen A, Daffonchio D, Boudabous A, Tisa LS, Klenk HP, Armengaud J, Normand P, Gtari M, Stone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes. ISME J, 10(1):21-9(2016) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: shotgun proteomics
proteogenomics
bacteria
stone

curator keyword: Biological

submitter keyword: shotgun proteomics

proteogenomics

bacteria

stone

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, DSV-iBEB-SBTN-LBSP, 30207 Bagnols-sur-Cèze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/08/PXD001518
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/08/PXD001518

PRIDE project URI

Repository Record List

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