PXD001280

PXD001280 is an original dataset announced via ProteomeXchange.

Title	Shotgun proteomic analysis of Bordetella pertussis response to iron availability
Description	B. pertussis Tohama I was cultivated in iron-depleted or iron-repleted medium in order to monitor proteins which are influence by iron supply. More than 200 proteins displayed increased or decreased levels. Proteins involved in iron acquisition, biofilm production and oxidative stress response were increased during iron starvation. Limited iron supply caused on the other hand decreased levels of virulence factors regulated by the BvgAS system.
HostingRepository	PRIDE
AnnounceDate	2015-03-16
AnnouncementXML	Submission_2015-03-16_06:42:10.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kristin Surmann
SpeciesList	scientific name: Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251); NCBI TaxID: 257313;
ModificationList	monohydroxylated residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2014-09-03 02:12:51	ID requested
⏵ 1	2015-03-16 06:42:11	announced

Alvarez Hayes J, Lamberti Y, Surmann K, Schmidt F, V, ö, lker U, Rodriguez ME, Shotgun proteome analysis of Bordetella pertussis reveals a distinct influence of iron availability on the bacterial metabolism, virulence, and defense response. Proteomics, 15(13):2258-66(2015) [pubmed]

curator keyword: Biological

submitter keyword: B. pertussis, iron limitation, shotgun proteomics

Frank Schmidt
contact affiliation	ZIK-FunGene Junior Research Group Applied Proteomics, University Medicine Greifswald, Greifswald, Germany
contact email	frank.schmidt@uni-greifswald.de
lab head
Kristin Surmann
contact affiliation	University Medicine Greifswald
contact email	surmannk@uni-greifswald.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/03/PXD001280

PRIDE project URI

• PRIDE
  1. PXD001280
     1. Label: PRIDE project
     2. Name: Shotgun proteomic analysis of Bordetella pertussis response to iron availability